UCSF ChimeraX: Structure visualization for researchers, educators, and developers

Article Properties
  • Language
    English
  • DOI (url)
  • Publication Date
    2020/10/22
  • Journal
  • Indian UGC (journal)
  • Refrences
    38
  • Citations
    3,309
  • Eric F. Pettersen Department of Pharmaceutical Chemistry University of California San Francisco San Francisco California USA
  • Thomas D. Goddard Department of Pharmaceutical Chemistry University of California San Francisco San Francisco California USA
  • Conrad C. Huang Department of Pharmaceutical Chemistry University of California San Francisco San Francisco California USA
  • Elaine C. Meng Department of Pharmaceutical Chemistry University of California San Francisco San Francisco California USA
  • Gregory S. Couch Department of Pharmaceutical Chemistry University of California San Francisco San Francisco California USA
  • Tristan I. Croll Cambridge Institute for Medical Research, Department of Haematology University of Cambridge Cambridge UK
  • John H. Morris Department of Pharmaceutical Chemistry University of California San Francisco San Francisco California USA ORCID (unauthenticated)
  • Thomas E. Ferrin Department of Pharmaceutical Chemistry University of California San Francisco San Francisco California USA ORCID (unauthenticated)
Abstract
Cite
Pettersen, Eric F., et al. “UCSF ChimeraX: Structure Visualization for Researchers, Educators, and Developers”. Protein Science, vol. 30, no. 1, 2020, pp. 70-82, https://doi.org/10.1002/pro.3943.
Pettersen, E. F., Goddard, T. D., Huang, C. C., Meng, E. C., Couch, G. S., Croll, T. I., Morris, J. H., & Ferrin, T. E. (2020). UCSF ChimeraX: Structure visualization for researchers, educators, and developers. Protein Science, 30(1), 70-82. https://doi.org/10.1002/pro.3943
Pettersen, Eric F., Thomas D. Goddard, Conrad C. Huang, Elaine C. Meng, Gregory S. Couch, Tristan I. Croll, John H. Morris, and Thomas E. Ferrin. “UCSF ChimeraX: Structure Visualization for Researchers, Educators, and Developers”. Protein Science 30, no. 1 (2020): 70-82. https://doi.org/10.1002/pro.3943.
Pettersen EF, Goddard TD, Huang CC, Meng EC, Couch GS, Croll TI, et al. UCSF ChimeraX: Structure visualization for researchers, educators, and developers. Protein Science. 2020;30(1):70-82.
Refrences
Title Journal Journal Categories Citations Publication Date
ISOLDE: A physically realistic environment for model building into low‐resolution electron‐density maps Acta Crystallographica 2018
10.1101/2020.05.22.110189
Announcing the worldwide Protein Data Bank Nature Structural & Molecular Biology
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  • Science: Chemistry: Organic chemistry: Biochemistry
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BioCatalogue: a universal catalogue of web services for the life sciences Nucleic Acids Research
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  • Science: Chemistry: Organic chemistry: Biochemistry
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Citations Analysis
Category Category Repetition
Science: Biology (General)1,327
Science: Chemistry: Organic chemistry: Biochemistry949
Science: Science (General)838
Science: Biology (General): Genetics531
Science: Biology (General): Cytology518
Science518
Science: Chemistry411
Science: Microbiology289
Science: Physics285
Science: Chemistry: General. Including alchemy245
Medicine197
Medicine: Therapeutics. Pharmacology136
Science: Chemistry: Analytical chemistry112
Agriculture: Plant culture102
Medicine: Internal medicine: Specialties of internal medicine: Immunologic diseases. Allergy99
Agriculture: Animal culture97
Medicine: Medicine (General)93
Science: Botany: Plant ecology91
Science: Chemistry: Physical and theoretical chemistry89
Medicine: Public aspects of medicine: Toxicology. Poisons81
Medicine: Internal medicine: Infectious and parasitic diseases78
Technology: Chemical technology: Biotechnology78
Science: Mathematics: Instruments and machines: Electronic computers. Computer science56
Science: Botany47
Science: Chemistry: Organic chemistry45
Science: Zoology45
Technology: Chemical technology: Polymers and polymer manufacture43
Technology: Chemical technology: Food processing and manufacture41
Agriculture38
Agriculture: Agriculture (General)38
Technology: Chemical technology36
Medicine: Internal medicine: Neurosciences. Biological psychiatry. Neuropsychiatry35
Technology: Electrical engineering. Electronics. Nuclear engineering: Materials of engineering and construction. Mechanics of materials35
Medicine: Medicine (General): Computer applications to medicine. Medical informatics33
Science: Chemistry: Crystallography33
Science: Science (General): Cybernetics: Information theory25
Medicine: Medicine (General): Medical technology24
Technology: Home economics: Nutrition. Foods and food supply20
Science: Physiology19
Science: Physics: Atomic physics. Constitution and properties of matter19
Technology: Environmental technology. Sanitary engineering19
Science: Biology (General): Evolution19
Science: Chemistry: Inorganic chemistry17
Science: Physics: Nuclear and particle physics. Atomic energy. Radioactivity17
Science: Biology (General): Ecology15
Technology: Chemical technology: Chemical engineering15
Medicine: Internal medicine: Specialties of internal medicine: Diseases of the endocrine glands. Clinical endocrinology14
Medicine: Internal medicine: Neurosciences. Biological psychiatry. Neuropsychiatry: Neurology. Diseases of the nervous system14
Medicine: Pharmacy and materia medica14
Technology: Engineering (General). Civil engineering (General)13
Geography. Anthropology. Recreation: Environmental sciences12
Medicine: Internal medicine: Neoplasms. Tumors. Oncology. Including cancer and carcinogens12
Medicine: Internal medicine: Specialties of internal medicine: Diseases of the circulatory (Cardiovascular) system11
Medicine: Internal medicine: Specialties of internal medicine: Diseases of the blood and blood-forming organs11
Medicine: Other systems of medicine9
Social Sciences: Industries. Land use. Labor: Special industries and trades: Energy industries. Energy policy. Fuel trade7
Medicine: Internal medicine7
Social Sciences6
Technology: Electrical engineering. Electronics. Nuclear engineering: Electronics: Computer engineering. Computer hardware6
Medicine: Internal medicine: Special situations and conditions: Arctic medicine. Tropical medicine5
Technology: Engineering (General). Civil engineering (General): Environmental engineering5
Social Sciences: Sociology (General)5
Science: Mathematics: Instruments and machines: Electronic computers. Computer science: Computer software5
Science: Natural history (General): Microscopy5
Medicine: Pathology4
Technology: Chemical technology: Fuel4
Medicine: Internal medicine: Specialties of internal medicine: Nutritional diseases. Deficiency diseases4
Science: Microbiology: Microbial ecology4
Medicine: Internal medicine: Special situations and conditions: Industrial medicine. Industrial hygiene3
Technology3
Science: Mathematics: Instruments and machines3
Agriculture: Animal culture: Veterinary medicine2
Technology: Mechanical engineering and machinery: Renewable energy sources2
Medicine: Internal medicine: Specialties of internal medicine: Diseases of the digestive system. Gastroenterology2
Geography. Anthropology. Recreation: Oceanography2
Agriculture: Aquaculture. Fisheries. Angling2
Technology: Mechanical engineering and machinery2
Technology: Hydraulic engineering: River, lake, and water-supply engineering (General)1
Science: Mathematics1
Medicine: Dentistry1
Science: Physics: Optics. Light1
Science: Human anatomy1
Science: Physiology: Animal biochemistry1
Naval Science: Naval architecture. Shipbuilding. Marine engineering1
Naval Science1
Technology: Ocean engineering1
Science: Geology1
Medicine: Internal medicine: Specialties of internal medicine: Diseases of the respiratory system1
Medicine: Pediatrics1
Geography. Anthropology. Recreation: Recreation. Leisure: Sports1
Technology: Electrical engineering. Electronics. Nuclear engineering: Electronics1
Technology: Technology (General)1
Medicine: Internal medicine: Specialties of internal medicine: Diseases of the genitourinary system. Urology1
Technology: Mining engineering. Metallurgy1
General Works1
Technology: Electrical engineering. Electronics. Nuclear engineering: Electric apparatus and materials. Electric circuits. Electric networks1
Technology: Electrical engineering. Electronics. Nuclear engineering: Telecommunication1
Technology: Technology (General): Industrial engineering. Management engineering: Information technology1
Medicine: Other systems of medicine: Miscellaneous systems and treatments1
Education: Education (General)1
The category Science: Biology (General) 1,327 is the most commonly referenced area in studies that cite this article. The first research to cite this article was titled Paired Heavy and Light Chain Signatures Contribute to Potent SARS-CoV-2 Neutralization in Public Antibody Responses and was published in 2020. The most recent citation comes from a 2024 study titled Exploring the Diverse Landscape of Fungal Cytochrome P450‐Catalyzed Regio‐ and Stereoselective Dimerization of Diketopiperazines. This article reached its peak citation in 2023, with 1,450 citations. It has been cited in 664 different journals, 25% of which are open access. Among related journals, the Nature Communications cited this research the most, with 367 citations. The chart below illustrates the annual citation trends for this article.
Citations used this article by year