| 58 | Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks | |
- Science: Biology (General)
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| 2003/11/01 | English | 28,590 |
| 153 | The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data | |
- Science: Biology (General)
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| 2010/07/19 | English | 16,739 |
| 164 | SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing | |
- Medicine: Medicine (General): Computer applications to medicine. Medical informatics
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| 2012/05/01 | English | 16,322 |
| 212 | Full-length transcriptome assembly from RNA-Seq data without a reference genome | |
- Science: Biology (General)
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| 2011/05/15 | English | 13,961 |
| 327 | Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation | |
- Science: Biology (General)
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| 2010/05/01 | English | 11,030 |
| 390 | MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification | |
- Science: Biology (General)
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| 2008/11/30 | English | 10,065 |
| 427 | Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 | |
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| 2019/07/24 | English | 9,621 |
| 507 | Integrative genomics viewer | |
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| 2011/01/01 | English | 8,800 |
| 525 | WebLogo: A Sequence Logo Generator: Figure 1 | |
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| 2004/06/01 | English | 8,648 |
| 538 | The RAST Server: Rapid Annotations using Subsystems Technology | |
- Science: Biology (General): Genetics
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| 2008/02/08 | English | 8,544 |
| 751 | Circos: An information aesthetic for comparative genomics | |
- Science: Biology (General)
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| 2009/06/18 | English | 7,093 |
| 768 | Velvet: Algorithms for de novo short read assembly using de Bruijn graphs | |
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| 2008/03/18 | English | 7,019 |
| 796 | How useful is SBF in predicting in vivo bone bioactivity? | |
- Medicine: Medicine (General): Medical technology
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- Technology: Electrical engineering. Electronics. Nuclear engineering: Materials of engineering and construction. Mechanics of materials
| 2006/05/01 | English | 6,881 |
| 797 | Commentary: The Materials Project: A materials genome approach to accelerating materials innovation | |
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| 2013/07/01 | English | 6,878 |
| 899 | StringTie enables improved reconstruction of a transcriptome from RNA-seq reads | |
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| 2015/02/18 | English | 6,482 |
| 917 | Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences | |
- Science: Biology (General)
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| 2013/08/25 | English | 6,423 |
| 1098 | Most mammalian mRNAs are conserved targets of microRNAs | |
- Science: Biology (General)
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| 2008/10/27 | English | 5,840 |
| 1103 | Biodiesel from microalgae | |
- Science: Biology (General)
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| 2007/05/01 | English | 5,831 |
| 1104 | Integrating single-cell transcriptomic data across different conditions, technologies, and species | |
- Science: Biology (General)
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| 2018/04/02 | English | 5,829 |
| 1128 | CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes | |
- Science: Biology (General)
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| 2015/05/14 | English | 5,772 |