Assembly and Analysis of Cell-Scale Membrane Envelopes
Article Properties
-
LanguageEnglish
-
DOI (url)
-
Publication Date2021/12/15
-
Indian UGC (journal)
-
Refrences116
-
Citations14
-
Josh V. Vermaas Biosciences Center, National Renewable Energy Laboratory, Golden, Colorado 80401, United StatesTheoretical and Computational Biophysics Group, NIH Center for Macromolecular Modeling and Bioinformatics, Beckman Institute for Advanced Science and Technology, Department of Biochemistry, and Center for Biophysics and Quantitative Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States ORCID
-
Christopher G. Mayne Theoretical and Computational Biophysics Group, NIH Center for Macromolecular Modeling and Bioinformatics, Beckman Institute for Advanced Science and Technology, Department of Biochemistry, and Center for Biophysics and Quantitative Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States
-
Eric Shinn Theoretical and Computational Biophysics Group, NIH Center for Macromolecular Modeling and Bioinformatics, Beckman Institute for Advanced Science and Technology, Department of Biochemistry, and Center for Biophysics and Quantitative Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States
-
Emad Tajkhorshid Theoretical and Computational Biophysics Group, NIH Center for Macromolecular Modeling and Bioinformatics, Beckman Institute for Advanced Science and Technology, Department of Biochemistry, and Center for Biophysics and Quantitative Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States ORCID
Cite
Vermaas, Josh V., et al. “Assembly and Analysis of Cell-Scale Membrane Envelopes”. Journal of Chemical Information and Modeling, vol. 62, no. 3, 2021, pp. 602-17, https://doi.org/10.1021/acs.jcim.1c01050.
Vermaas, J. V., Mayne, C. G., Shinn, E., & Tajkhorshid, E. (2021). Assembly and Analysis of Cell-Scale Membrane Envelopes. Journal of Chemical Information and Modeling, 62(3), 602-617. https://doi.org/10.1021/acs.jcim.1c01050
Vermaas, Josh V., Christopher G. Mayne, Eric Shinn, and Emad Tajkhorshid. “Assembly and Analysis of Cell-Scale Membrane Envelopes”. Journal of Chemical Information and Modeling 62, no. 3 (2021): 602-17. https://doi.org/10.1021/acs.jcim.1c01050.
Vermaas JV, Mayne CG, Shinn E, Tajkhorshid E. Assembly and Analysis of Cell-Scale Membrane Envelopes. Journal of Chemical Information and Modeling. 2021;62(3):602-17.
Journal Categories
Medicine
Therapeutics
Pharmacology
Science
Chemistry
Science
Chemistry
General
Including alchemy
Science
Mathematics
Instruments and machines
Electronic computers
Computer science
Science
Science (General)
Cybernetics
Information theory
You May Also Like
- Protein and ligand preparation: parameters, protocols, and influence on virtual screening enrichments
- Epik: a software program for pK a prediction and protonation state generation for drug-like molecules
- Ligand docking and binding site analysis with PyMOL and Autodock/Vina
- Automatic atom type and bond type perception in molecular mechanical calculations
- Quantitative analysis of molecular surface based on improved Marching Tetrahedra algorithm
Refrences
| Title | Journal | Journal Categories | Citations | Publication Date |
|---|---|---|---|---|
Gephi: An Open Source Software for Exploring and Manipulating Networks | Proceedings of the International AAAI Conference on Web and Social Media | 3,549 | 2009 | |
| Self-Assembly Simulations of Classic Claudins—Insights into the Pore Structure, Selectivity, and Higher Order Complexes | The Journal of Physical Chemistry B |
| 31 | 2018 |
| Reduced Lateral Mobility of Lipids and Proteins in Crowded Membranes | PLOS Computational Biology |
| 125 | 2013 |
| Diffusion of Integral Membrane Proteins in Protein-Rich Membranes | The Journal of Physical Chemistry Letters |
| 60 | 2017 |
| Lipid and Peptide Diffusion in Bilayers: The Saffman–Delbrück Model and Periodic Boundary Conditions | The Journal of Physical Chemistry B |
| 84 | 2017 |
Citations
| Title | Journal | Journal Categories | Citations | Publication Date |
|---|---|---|---|---|
| Mesoscale simulations: An indispensable approach to understand biomembranes | Biophysical Journal |
| 4 | 2023 |
| Molecular architecture and dynamics of SARS-CoV-2 envelope by integrative modeling | Structure |
| 15 | 2023 |
| Unbreaking Assemblies in Molecular Simulations with Periodic Boundaries | Journal of Chemical Information and Modeling |
| 2 | 2023 |
| VMD as a Platform for Interactive Small Molecule Preparation and Visualization in Quantum and Classical Simulations | Journal of Chemical Information and Modeling |
| 5 | 2023 |
| Understanding Virus Structure and Dynamics through Molecular Simulations | Journal of Chemical Theory and Computation |
| 5 | 2023 |
Citations Analysis
The category
Science: Biology (General) 8
is the most commonly referenced area in studies that cite this article. The first research to cite this article was titled Activation energy and force fields during topological transitions of fluid lipid vesicles and was published in 2022. The most recent citation comes from a 2023 study titled VMD as a Platform for Interactive Small Molecule Preparation and Visualization in Quantum and Classical Simulations. This article reached its peak citation in 2023, with 9 citations. It has been cited in 13 different journals, 38% of which are open access. Among related journals, the Journal of Chemical Information and Modeling cited this research the most, with 2 citations. The chart below illustrates the annual citation trends for this article.