| Fluorescence microscopy | 2005/11/18 | English | 966 |
| Proteoform: a single term describing protein complexity | 2013/02/27 | English | 965 |
| MiXCR: software for comprehensive adaptive immunity profiling | 2015/04/29 | English | 955 |
| Direct detection of DNA methylation during single-molecule, real-time sequencing | 2010/05/09 | English | 946 |
| miRWalk2.0: a comprehensive atlas of microRNA-target interactions | 2015/07/30 | English | 932 |
| Functional cortical neurons and astrocytes from human pluripotent stem cells in 3D culture | 2015/05/25 | English | 932 |
| Next-generation sequencing transforms today's biology | 2007/12/19 | English | 931 |
| Evaluation of fluorophores for optimal performance in localization-based super-resolution imaging | 2011/11/06 | English | 923 |
| Chemically defined conditions for human iPSC derivation and culture | 2011/04/10 | English | 921 |
| Three-dimensional culture models of normal and malignant breast epithelial cells | 2007/03/29 | English | 916 |
| U-Net: deep learning for cell counting, detection, and morphometry | 2018/12/17 | English | 914 |
| Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex | 2008/02/10 | English | 913 |
| Icy: an open bioimage informatics platform for extended reproducible research | 2012/06/28 | English | 907 |
| Genetically encoded fluorescent indicator for intracellular hydrogen peroxide | 2006/03/22 | English | 907 |
| Improved whole-chromosome phasing for disease and population genetic studies | 2013/01/01 | English | 897 |
| Analysis and design of RNA sequencing experiments for identifying isoform regulation | 2010/11/07 | English | 893 |
| Species-level functional profiling of metagenomes and metatranscriptomes | 2018/10/30 | English | 891 |
| Sensitive protein alignments at tree-of-life scale using DIAMOND | 2021/04/01 | English | 891 |
| Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing | 2007/06/11 | English | 885 |
| Selected reaction monitoring–based proteomics: workflows, potential, pitfalls and future directions | 2012/05/30 | English | 879 |
| Prevention of overfitting in cryo-EM structure determination | 2012/07/29 | English | 862 |
| Differential analysis of RNA-seq incorporating quantification uncertainty | 2017/06/05 | English | 856 |
| Cellpose: a generalist algorithm for cellular segmentation | 2020/12/14 | English | 852 |
| RNA-guided gene activation by CRISPR-Cas9–based transcription factors | 2013/07/25 | English | 851 |
| Contrast agents for molecular photoacoustic imaging | 2016/07/28 | English | 848 |
| Moving beyond P values: data analysis with estimation graphics | 2019/06/19 | English | 831 |
| Single-cell mRNA quantification and differential analysis with Census | 2017/01/23 | English | 816 |
| High-density mapping of single-molecule trajectories with photoactivated localization microscopy | 2008/01/13 | English | 813 |
| Detecting overlapping protein complexes in protein-protein interaction networks | 2012/03/18 | English | 811 |
| SC3: consensus clustering of single-cell RNA-seq data | 2017/03/27 | English | 807 |