Bioinformatics

Titel Veröffentlichungsdatum Sprache Zitate
DIRECTEUR: transcriptome-based prediction of small molecules that replace transcription factors for direct cell conversion2024/01/25English
vcfpp: a C++ API for rapid processing of the variant call format2024/01/25English
TKSM: highly modular, user-customizable, and scalable transcriptomic sequencing long-read simulator2024/01/25English
Interpreting protein abundance in Saccharomyces cerevisiae through relational learning2024/01/25English
Statistical framework to determine indel-length distribution2024/01/25English
HiPhase: jointly phasing small, structural, and tandem repeat variants from HiFi sequencing2024/01/25English
MAGE: metafounders-assisted genomic estimation of breeding value, a novel additive-dominance single-step model in crossbreeding systems2024/01/24English
Multi-scale topology and position feature learning and relationship-aware graph reasoning for prediction of drug-related microbes2024/01/25English
A simple refined DNA minimizer operator enables 2-fold faster computation2024/01/25English
Text mining for contexts and relationships in cancer genomics literature2024/01/01English
YACHT: an ANI-based statistical test to detect microbial presence/absence in a metagenomic sample2024/01/24English
scKWARN: Kernel-weighted-average robust normalization for single-cell RNA-seq data2024/01/17English
Concurrent prediction of RNA secondary structures with pseudoknots and local 3D motifs in an integer programming framework2024/01/16English
DREAM: an R package for druggability evaluation of human complex diseases2023/07/01English
Information-incorporated sparse convex clustering for disease subtyping2023/06/29English
Robust joint clustering of multi-omics single-cell data via multi-modal high-order neighborhood Laplacian matrix optimization2023/06/29English
Building protein structure-specific rotamer libraries2023/07/01English
Feature weighted models to address lineage dependency in drug-resistance prediction from Mycobacterium tuberculosis genome sequences2023/07/01English
Unravelling spatial gene associations with SEAGAL: a Python package for spatial transcriptomics data analysis and visualization2023/07/01English
Counting pseudoalignments to novel splicing events2023/07/01English
LSMMD-MA: scaling multimodal data integration for single-cell genomics data analysis2023/07/01English
GRETTA: an R package for mapping in silico genetic interaction and essentiality networks2023/06/16English
PS-Net: human perception-guided segmentation network for EM cell membrane2023/07/28English
ICARUS: flexible protein structural alignment based on Protein Units2023/07/27English
quickBAM: a parallelized BAM file access API for high-throughput sequence analysis informatics2023/07/27English
ReCo: automated NGS re ad- co unting of single and combinatorial CRISPR gRNAs2023/07/22English
Inference of microbial covariation networks using copula models with mixture margins2023/06/28English
LEGO-CSM: a tool for functional characterization of proteins2023/06/29English
Understanding the complementarity and plasticity of antibody–antigen interfaces2023/06/29English
Phylogenetic diversity statistics for all clades in a phylogeny2023/06/01English