| RELION: Implementation of a Bayesian approach to cryo-EM structure determination | 2012/12/01 | English | 3,544 |
| Computer Visualization of Three-Dimensional Image Data Using IMOD | 1996/01/01 | English | 3,465 |
| Automated electron microscope tomography using robust prediction of specimen movements | 2005/10/01 | English | 3,078 |
| CTFFIND4: Fast and accurate defocus estimation from electron micrographs | 2015/11/01 | English | 2,802 |
| Gctf: Real-time CTF determination and correction | 2016/01/01 | English | 2,402 |
| EMAN2: An extensible image processing suite for electron microscopy | 2007/01/01 | English | 2,221 |
| EMAN: Semiautomated Software for High-Resolution Single-Particle Reconstructions | 1999/12/01 | English | 1,955 |
| XtalView/Xfit—A Versatile Program for Manipulating Atomic Coordinates and Electron Density | 1999/04/01 | English | 1,750 |
| SPIDER and WEB: Processing and Visualization of Images in 3D Electron Microscopy and Related Fields | 1996/01/01 | English | 1,671 |
| Automated molecular microscopy: The new Leginon system | 2005/07/01 | English | 1,184 |
| A New Generation of the IMAGIC Image Processing System | 1996/01/01 | English | 976 |
| Feature point tracking and trajectory analysis for video imaging in cell biology | 2005/08/01 | English | 936 |
| Dual-Axis Tomography: An Approach with Alignment Methods That Preserve Resolution | 1997/12/01 | English | 733 |
| Review: History of the Amyloid Fibril | 2000/06/01 | English | 695 |
| Visualizing density maps with UCSF Chimera | 2007/01/01 | English | 642 |
| Appion: An integrated, database-driven pipeline to facilitate EM image processing | 2009/04/01 | English | 640 |
| Mechanism of thioflavin T binding to amyloid fibrils | 2005/09/01 | English | 624 |
| Mineralization in Ferritin: An Efficient Means of Iron Storage | 1999/06/01 | English | 580 |
| MRC Image Processing Programs | 1996/01/01 | English | 570 |
| Evolutionary history and higher order classification of AAA+ ATPases | 2004/04/01 | English | 569 |
| The binding of thioflavin-T to amyloid fibrils: localisation and implications | 2005/01/01 | English | 568 |
| Fourier shell correlation threshold criteria | 2005/09/01 | English | 546 |
| Review: Alzheimer's Amyloid β-Peptide-Associated Free Radical Oxidative Stress and Neurotoxicity | 2000/06/01 | English | 526 |
| A structural analysis of M protein in coronavirus assembly and morphology | 2011/04/01 | English | 498 |
| Nuclear Lamins: Their Structure, Assembly, and Interactions | 1998/01/01 | English | 478 |
| Cyanobacterial Phycobilisomes | 1998/12/01 | English | 453 |
| Lamellar Bone: Structure–Function Relations | 1999/06/01 | English | 444 |
| UCSF Chimera, MODELLER, and IMP: An integrated modeling system | 2012/09/01 | English | 436 |
| Protein Repeats: Structures, Functions, and Evolution | 2001/05/01 | English | 436 |
| Fibrillar Structure and Mechanical Properties of Collagen | 1998/01/01 | English | 436 |