Title	Publication Date	Language	Citations
The Influence of Gene Flow on Species Tree Estimation: A Simulation Study	2013/09/18	English	234
Total-Evidence Dating under the Fossilized Birth–Death Process	2015/10/22	English	234
Testing the Reliability of Genetic Methods of Species Identification via Simulation	2008/04/01	English	234
Hylid Frog Phylogeny and Sampling Strategies for Speciose Clades	2005/10/01	English	232
Cases in which Parsimony or Compatibility Methods will be Positively Misleading	1978/12/01	English	231
Biogeographic Analysis Reveals Ancient Continental Vicariance and Recent Oceanic Dispersal in Amphibians	2014/06/19	English	231
Modeling Site Heterogeneity with Posterior Mean Site Frequency Profiles Accelerates Accurate Phylogenomic Estimation	2017/08/07	English	229
Is Sparse Taxon Sampling a Problem for Phylogenetic Inference?	2003/02/01		227
Short Tree, Long Tree, Right Tree, Wrong Tree: New Acquisition Bias Corrections for Inferring SNP Phylogenies	2015/07/29	English	227
Testing Species Phylogenies and Phylogenetic Methods with Congruence	1995/03/01	English	225
Target Capture and Massively Parallel Sequencing of Ultraconserved Elements for Comparative Studies at Shallow Evolutionary Time Scales	2013/10/22	English	225
Triploblastic Relationships with Emphasis on the Acoelomates and the Position of Gnathostomulida, Cycliophora, Plathelminthes, and Chaetognatha: A Combined Approach of 18S rDNA Sequences and Morphology	2000/09/01	English	225
Multiple Continental Radiations and Correlates of Diversification in Lupinus (Leguminosae): Testing for Key Innovation with Incomplete Taxon Sampling	2012/01/05	English	224
Quantitative Traits and Diversification	2010/09/30	English	223
Medusozoan Phylogeny and Character Evolution Clarified by New Large and Small Subunit rDNA Data and an Assessment of the Utility of Phylogenetic Mixture Models	2006/02/01	English	222
Calibration Choice, Rate Smoothing, and the Pattern of Tetrapod Diversification According to the Long Nuclear Gene RAG-1	2007/08/01	English	222
Aligned 18S and Insect Phylogeny	2004/06/01	English	221
Estimating Divergence Times in Large Phylogenetic Trees	2007/10/01	English	221
The Evolution of Body Size, Cope's Rule and the Origin of Amniotes	2004/08/01	English	220
Fast Dating Using Least-Squares Criteria and Algorithms	2015/09/30	English	220
Evidence for Time Dependency of Molecular Rate Estimates	2007/06/01	English	219
Polytomies and Bayesian Phylogenetic Inference	2005/04/01	English	215
Phylogeny Reconstruction: The Role of Morphology	2003/08/01	English	213
Calibrated Tree Priors for Relaxed Phylogenetics and Divergence Time Estimation	2011/08/18	English	212
Character Analysis in Morphological Phylogenetics: Problems and Solutions	2001/09/01	English	212
Historical Biogeography, Divergence Times, and Diversification Patterns of Bumble Bees (Hymenoptera: Apidae: Bombus)	2008/02/01	English	212
Species Delimitation Using Bayes Factors: Simulations and Application to the Sceloporus scalaris Species Group (Squamata: Phrynosomatidae)	2013/12/25	English	211
Resolution of Phylogenetic Conflict in Large Data Sets by Increased Taxon Sampling	2006/06/01	English	209
Environmental Diversity of Bacteria and Archaea	2001/08/01		208
Detecting and Overcoming Systematic Errors in Genome-Scale Phylogenies	2007/06/01	English	208