| Fast, scalable generation of high‐quality protein multiple sequence alignments using Clustal Omega | 2011/01/01 | English | 10,031 |
| Construction of
Escherichia coli
K‐12 in‐frame, single‐gene knockout mutants: the Keio collection | 2006/01/01 | English | 5,185 |
| Selected reaction monitoring for quantitative proteomics: a tutorial | 2008/01/01 | English | 967 |
| A genome‐scale metabolic reconstruction for
Escherichia coli
K‐12 MG1655 that accounts for 1260 ORFs and thermodynamic information | 2007/01/01 | English | 889 |
| Current best practices in single‐cell RNA‐seq analysis: a tutorial | 2019/06/01 | English | 886 |
| Network‐based classification of breast cancer metastasis | 2007/01/01 | English | 884 |
| Deep learning for computational biology | 2016/07/01 | English | 761 |
| Deep proteome and transcriptome mapping of a human cancer cell line | 2011/01/01 | English | 740 |
| Potential of fecal microbiota for early‐stage detection of colorectal cancer | 2014/11/01 | English | 719 |
| A comprehensive genome‐scale reconstruction of
Escherichia coli
metabolism—2011 | 2011/01/01 | English | 674 |
| Large‐scale mapping of human protein–protein interactions by mass spectrometry | 2007/01/01 | English | 668 |
| Ultrasensitive proteome analysis using paramagnetic bead technology | 2014/10/01 | English | 644 |
| A comprehensive pathway map of epidermal growth factor receptor signaling | 2005/01/01 | English | 641 |
| Feedback between p21 and reactive oxygen production is necessary for cell senescence | 2010/01/01 | English | 630 |
| The protein expression profile of ACE2 in human tissues | 2020/07/01 | English | 618 |
| Network‐based prediction of protein function | 2007/01/01 | English | 598 |
| The quantitative proteome of a human cell line | 2011/01/01 | English | 577 |
| Data‐independent acquisition‐based
SWATH
‐
MS
for quantitative proteomics: a tutorial | 2018/08/01 | English | 565 |
| Synthetic biology: new engineering rules for an emerging discipline | 2006/01/01 | English | 559 |
| A side effect resource to capture phenotypic effects of drugs | 2010/01/01 | English | 539 |
| Applications of genome‐scale metabolic reconstructions | 2009/01/01 | English | 521 |
| Novel biomarkers for pre‐diabetes identified by metabolomics | 2012/01/01 | English | 516 |
| Differential network biology | 2012/01/01 | English | 498 |
| A uniform proteomics MS/MS analysis platform utilizing open XML file formats | 2005/01/01 | English | 488 |
| Revisiting biomarker discovery by plasma proteomics | 2017/09/01 | English | 481 |
| PREDICT: a method for inferring novel drug indications with application to personalized medicine | 2011/01/01 | English | 478 |
| The endocannabinoid system links gut microbiota to adipogenesis | 2010/01/01 | English | 475 |
| Multi‐Omics Factor Analysis—a framework for unsupervised integration of multi‐omics data sets | 2018/06/01 | English | 471 |
| Systematic evaluation of objective functions for predicting intracellular fluxes in
Escherichia coli | 2007/01/01 | English | 460 |
| Towards a theory of biological robustness | 2007/01/01 | English | 444 |