Source Code for Biology and Medicine

Title Publication Date Language Citations
ParaHaplo: A program package for haplotype-based whole-genome association study using parallel computing2009/10/21English5
LSID Tester, a tool for testing Life Science Identifier resolution services2008/02/18English5
EST-PAC a web package for EST annotation and protein sequence prediction2006/10/12English5
goSTAG: gene ontology subtrees to tag and annotate genes within a set2017/04/13English5
BLASTPLOT: a PERL module to plot next generation sequencing NCBI-BLAST results2014/03/31English5
KBWS: an EMBOSS associated package for accessing bioinformatics web services2011/04/29English4
BatTool: an R package with GUI for assessing the effect of White-nose syndrome and other take events on Myotis spp. of bats2014/05/06English4
BISON: bio-interface for the semi-global analysis of network patterns2006/11/29English4
CrypticIBDcheck: an R package for checking cryptic relatedness in nominally unrelated individuals2013/02/06English4
How Not to Be a Bioinformatician2012/05/28English4
Annokey: an annotation tool based on key term search of the NCBI Entrez Gene database2014/06/26English4
A methodology for projecting hospital bed need: a Michigan case study2010/03/25English4
Sig2BioPAX: Java tool for converting flat files to BioPAX Level 3 format2011/03/21English4
SLIMarray: Lightweight software for microarray facility management2006/10/26English3
JobCenter: an open source, cross-platform, and distributed job queue management system optimized for scalability and versatility2012/07/30English3
popRange: a highly flexible spatially and temporally explicit Wright-Fisher simulator2015/04/11English3
Using the value of Lin’s concordance correlation coefficient as a criterion for efficient estimation of areas of leaves of eelgrass from noisy digital images2014/12/01English3
Analysis by siRNA_profile program displays novel thermodynamic characteristics of highly functional siRNA molecules2008/05/21English3
VersaCount: customizable manual tally software for cell counting2010/01/13English3
CADLIVE optimizer: web-based parameter estimation for dynamic models2012/08/28English3
LimsPortal and BonsaiLIMS: development of a lab information management system for translational medicine2011/05/13English3
cljam: a library for handling DNA sequence alignment/map (SAM) with parallel processing2016/08/17English3
Implementation of the Rank-Weighted Co-localization (RWC) algorithm in multiple image analysis platforms for quantitative analysis of microscopy images2016/02/16English3
FlexDM: Simple, parallel and fault-tolerant data mining using WEKA2015/11/17English3
TRX-LOGOS - a graphical tool to demonstrate DNA information content dependent upon backbone dynamics in addition to base sequence2015/09/25English3
PROPER: Performance visualization for optimizing and comparing ranking classifiers in MATLAB2015/12/01English3
Simulating pedigrees ascertained for multiple disease-affected relatives2018/10/15English3
WebGimm: An integrated web-based platform for cluster analysis, functional analysis, and interactive visualization of results2011/01/17English3
A web server for interactive and zoomable Chaos Game Representation images2009/09/17English3
Simple tools for assembling and searching high-density picolitre pyrophosphate sequence data2008/04/18English3