Journal of Biomolecular Structure and Dynamics

Title Publication Date Language Citations
Synonymous Codon Usage inLactococcus lactis: Mutational Bias Versus Translational Selection2004/02/01English91
Molecular Dynamic Simulations of Environment and Sequence Dependent DNA Conformations: The Development of the BMS Nucleic Acid Force Field and Comparison with Experimental Results1998/12/01English91
DNA Interaction with Naturally Occurring Antioxidant Flavonoids Quercetin, Kaempferol, and Delphinidin2005/06/01English90
Role of ELA region in auto-activation of mutant KIT receptor: a molecular dynamics simulation insight2013/06/20English90
Molecular docking, validation, dynamics simulations, and pharmacokinetic prediction of natural compounds against the SARS-CoV-2 main-protease2020/09/08English90
Intramolecular CH…O Hydrogen Bonds in the AI and BI DNA-like Conformers of Canonical Nucleosides and their Watson-Crick Pairs. Quantum Chemical and AIM Analysis2011/08/01English90
Withanone and Withaferin-A are predicted to interact with transmembrane protease serine 2 (TMPRSS2) and block entry of SARS-CoV-2 into cells2020/06/16English90
The Effect of Crystal Packing on Oligonucleotide Double Helix Structure1987/12/01English89
New Methodology for Computer-Aided Modelling of Biomolecular Structure and Dynamics 1. Non-Cyclic Structures1989/02/01English89
Torsional and Bending Rigidity of the Double Helix from Data on Small DNA Rings1985/02/01English89
The Role in Cell Binding of a β1-bend within the Triple Helical Region in Collagen αl(I) Chain: Structural and Biological Evidence for Conformational Tautomerism on Fiber Surface1997/04/01English89
Identification of potential natural inhibitors of SARS-CoV2 main protease by molecular docking and simulation studies2020/06/11English88
High-Speed DNA Sequencing: An Approach Based Upon Fluorescence Detection of Single Molecules1989/10/01English88
Multi-spectroscopic and molecular modeling studies to reveal the interaction between propyl acridone and calf thymus DNA in the presence of histone H1: binary and ternary approaches2018/02/06English88
In silicoidentification of potential inhibitors fromCinnamonagainst main protease and spike glycoprotein of SARS CoV-22020/06/22English86
Structural Model of the Pre-pore Ring-like Structure of Panton-Valentine Leukocidin: Providing Dimensionality to Biophysical and Mutational Data2010/08/01English85
Terminators of Transcription with RNA Polymerase fromEscherichia coli:What They Look Like and How to Find Them1986/02/01English85
Effect of Excluded Volume on Topological Properties of Circular DNA1988/06/01English85
What is the Effective Component in Suanzaoren Decoction for Curing Insomnia? Discovery by Virtual Screening and Molecular Dynamic Simulation2008/08/01English85
Protein dynamics and motions in relation to their functions: several case studies and the underlying mechanisms2013/03/25English84
Structural Studies of DNA Fragments: The G·T Wobble Base Pair in A, B and Z DNA; The G·A Base Pair in B-DNA1985/10/01English84
Simulation of Interactions between Nucleic Acid Bases by Refined Atom-Atom Potential Functions1986/02/01English84
Nonplanar DNA Base Pairs1996/04/01English84
Using integrated computational approaches to identify safe and rapid treatment for SARS-CoV-22020/05/15English84
Natural products may interfere with SARS-CoV-2 attachment to the host cell2020/05/05English82
NSAIDs as potential treatment option for preventing amyloid β toxicity in Alzheimer’s disease: an investigation by docking, molecular dynamics, and DFT studies2017/06/15English82
Probing the interaction of lysozyme with ciprofloxacin in the presence of different-sized Ag nano-particles by multispectroscopic techniques and isothermal titration calorimetry2013/05/10English82
Ordered Water Structure in an A-DNA Octamer at 1.7Å Resolution1986/02/01English82
Hydration of Nucleic Acid Bases Studied Using Novel Atom-Atom Potential Functions1984/10/01English81
A comparison study of the interaction between β-lactoglobulin and retinol at two different conditions: spectroscopic and molecular modeling approaches2014/11/17English81